News
3/28/22: Our group officially moved to Cedar-Sinai Medical Center to the new Department of Computational Biomedicine!
3/13/22: Amanda and Ali’s preprint was posted to medRxiv! “Clinical interpretation of machine learning models for prediction of diabetic complications using electronic health records”
1/28/22: Quinn’s paper was published in PLoS Computational Biology! “Positional SHAP (PoSHAP) for Interpretation of machine learning models trained from biological sequences”
9/1/21: Caleb’s paper was published in Analytical Chemistry! “CsoDIAq software for direct infusion shotgun proteome analysis”
8/23/21: Our NIA R21 award was funded started 9/1/21. This project will fund one postdoc to work on a new drug discovery strategy for Alzheimer’s disease.
8/17/21: Our NIGMS R35 MIRA award was funded starting 9/1/21. This project will fund two postdocs to work on multi-omics data collection and integration.
5/17/21: Our review article is online at Cell Reports Methods! “Deep Learning Neural Network Tools for Proteomics”
5/13/21: Caleb’s preprint is online at bioRxiv! “CsoDIAq Software for Direct Infusion Shotgun Proteome Analysis (DISPA)”
3/5/21: Quinn’s preprint is online at bioRxiv! “Positional SHAP for Interpretation of Deep Learning Models Trained from Biological Sequences”
12/18/20: Our new Orbitrap Exploris 240 with FAIMS is installed!
12/16/20: The lab’s first independent paper is published in Journal of Proteome Research! https://doi.org/10.1021/acs.jproteome.0c00602